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accession-icon GSE1692
T98G growth arrest
  • organism-icon Homo sapiens
  • sample-icon 9 Downloadable Samples
  • Technology Badge Icon Affymetrix Human Genome U133A 2.0 Array (hgu133a2)

Description

Triplicate experiments from T98G cells under asynchronously growing, and growth arrest by serum deprivation and contact inhibition.

Publication Title

A common set of gene regulatory networks links metabolism and growth inhibition.

Sample Metadata Fields

No sample metadata fields

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accession-icon GSE54556
Gene expression during early infection by Fusarium graminearum in wheat lines susceptible and resistant to fusarium head blight
  • organism-icon Triticum aestivum
  • sample-icon 111 Downloadable Samples
  • Technology Badge Icon Affymetrix Wheat Genome Array (wheat)

Description

This SuperSeries is composed of the SubSeries listed below.

Publication Title

Identification of biomarker genes for resistance to a pathogen by a novel method for meta-analysis of single-channel microarray datasets.

Sample Metadata Fields

Specimen part

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accession-icon GSE54550
Gene expression in near isogenic spring wheat lines carrying or not the 2DL FHB resistance QTL during early infection with Fusarium graminearum, the major causal agent of fusarium head blight in wheat
  • organism-icon Triticum aestivum
  • sample-icon 30 Downloadable Samples
  • Technology Badge Icon Affymetrix Wheat Genome Array (wheat)

Description

Fusarium head blight (FHB) is a major disease of cereal crops caused by the fungus Fusarium graminearum (Fg). FHB affects the flowering heads (or spikes). This study compare the gene expression profile in wheat spikelets from near isogenic spring wheat lines carrying or not the FHB resistance QTL 2DL, after inoculation with water (H2O) or Fg; two inoculation methods were also compared, point and spray inoculation.

Publication Title

Identification of biomarker genes for resistance to a pathogen by a novel method for meta-analysis of single-channel microarray datasets.

Sample Metadata Fields

Specimen part

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accession-icon GSE54555
Gene expression in near isogenic spring wheat lines carrying different combinaison of the FHB resistance QTLs 2DL, 3BS and 5A during early infection with Fusarium graminearum, the major causal agent of fusarium head blight in wheat
  • organism-icon Triticum aestivum
  • sample-icon 19 Downloadable Samples
  • Technology Badge Icon Affymetrix Wheat Genome Array (wheat)

Description

Fusarium head blight (FHB) is a major disease of cereal crops caused by the fungus Fusarium graminearum (Fg). FHB affects the flowering heads (or spikes). This study compare the gene expression profile in wheat spikelets from near isogenic spring wheat lines carrying different combinaison of the FHB resistance QTLs 2DL, 3BS and 5A, after inoculation with water (H2O) or Fg; the point inoculation method was used.

Publication Title

Identification of biomarker genes for resistance to a pathogen by a novel method for meta-analysis of single-channel microarray datasets.

Sample Metadata Fields

Specimen part

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accession-icon GSE54554
Gene expression during early infection of the susceptible spring wheat cultivar Roblin with Fusarium graminearum strains producing or not DON.
  • organism-icon Triticum aestivum
  • sample-icon 16 Downloadable Samples
  • Technology Badge Icon Affymetrix Wheat Genome Array (wheat)

Description

Fusarium head blight (FHB) is a major disease of cereal crops caused by the fungus Fusarium graminearum (Fg). FHB affects the flowering heads (or spikes). This study compare the gene expression profile in wheat spikelets from the very susceptible spring wheat cultivar Roblin inoculated with either water (H2O), a Fg strain (GZ3639) producing the mycotoxin deoxynivalenol (+DON), or a GZ3639-derived Fg strain which has been inactivated at the Tri5 locus (-DON).

Publication Title

Identification of biomarker genes for resistance to a pathogen by a novel method for meta-analysis of single-channel microarray datasets.

Sample Metadata Fields

Specimen part

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accession-icon GSE36283
Gene expression during early infection of the susceptible spring wheat cultivar Roblin with Fusarium graminearum, the major causal agent of fusarium head blight in wheat
  • organism-icon Triticum aestivum
  • sample-icon 12 Downloadable Samples
  • Technology Badge Icon Affymetrix Wheat Genome Array (wheat)

Description

Fusarium head blight (FHB) is a major disease of cereal crops caused by the fungus Fusarium graminearum (Fg). FHB affects the flowering heads (or spikes). This study compare the gene expression profile in wheat spikelets from the very susceptible spring wheat cultivar Roblin inoculated with water (H2O) or Fg.

Publication Title

Identification of biomarker genes for resistance to a pathogen by a novel method for meta-analysis of single-channel microarray datasets.

Sample Metadata Fields

Specimen part

View Samples
accession-icon GSE54552
Gene expression during early infection of the resistant spring wheat cultivar NuyBay with Fusarium graminearum, the major causal agent of fusarium head blight in wheat
  • organism-icon Triticum aestivum
  • sample-icon 12 Downloadable Samples
  • Technology Badge Icon Affymetrix Wheat Genome Array (wheat)

Description

Fusarium head blight (FHB) is a major disease of cereal crops caused by the fungus Fusarium graminearum (Fg). FHB affects the flowering heads (or spikes). This study compare the gene expression profile in wheat spikelets from the resistant spring wheat cultivar NuyBay inoculated with water (H2O) or Fg.

Publication Title

Identification of biomarker genes for resistance to a pathogen by a novel method for meta-analysis of single-channel microarray datasets.

Sample Metadata Fields

Specimen part

View Samples
accession-icon GSE54551
Gene expression during early infection of the resistant winter wheat cultivar Dream with Fusarium graminearum, the major causal agent of fusarium head blight in wheat
  • organism-icon Triticum aestivum
  • sample-icon 12 Downloadable Samples
  • Technology Badge Icon Affymetrix Wheat Genome Array (wheat)

Description

Fusarium head blight (FHB) is a major disease of cereal crops caused by the fungus Fusarium graminearum (Fg). FHB affects the flowering heads (or spikes). This study compare the gene expression profile in wheat spikelets from the resistant winter wheat cultivar Dream inoculated with water (H2O) or Fg.

Publication Title

Identification of biomarker genes for resistance to a pathogen by a novel method for meta-analysis of single-channel microarray datasets.

Sample Metadata Fields

Specimen part

View Samples
accession-icon GSE54553
Gene expression during early infection of the resistant spring wheat cultivar Wuhan1 with Fusarium graminearum, the major causal agent of fusarium head blight in wheat
  • organism-icon Triticum aestivum
  • sample-icon 10 Downloadable Samples
  • Technology Badge Icon Affymetrix Wheat Genome Array (wheat)

Description

Fusarium head blight (FHB) is a major disease of cereal crops caused by the fungus Fusarium graminearum (Fg). FHB affects the flowering heads (or spikes). This study compare the gene expression profile in wheat spikelets from the resistant spring wheat cultivar Wuhan1 inoculated with water (H2O) or Fg.

Publication Title

Identification of biomarker genes for resistance to a pathogen by a novel method for meta-analysis of single-channel microarray datasets.

Sample Metadata Fields

Specimen part

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accession-icon GSE39553
Young and old HSCs from WT and Lnk-/- mice
  • organism-icon Mus musculus
  • sample-icon 14 Downloadable Samples
  • Technology Badge Icon Affymetrix Mouse Gene 1.0 ST Array (mogene10st)

Description

The adaptor protein Lnk is an important negative regulator of HSC homeostasis and self-renewal. This study aims to investigate the role of Lnk in HSC aging. Here we performed expression profiling of bone marrow CD150+CD48-LSK LT-HSCs from young and old WT and Lnk-/- mice. Results identify select Lnk-mediated pathways with potential involvement in HSC self-renewal and aging.

Publication Title

Lnk deficiency partially mitigates hematopoietic stem cell aging.

Sample Metadata Fields

Specimen part

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