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SRP078911
RNAseq from Dp16 and control mice
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Mus musculus
12 Downloadable Samples
Illumina HiSeq 2500
Submitter Supplied Information
Description
RNA was sequenced from Normal and DP 16 mice to identify consistent changes in gene expression across cohorts Overall design: Cells were cultured at subconfluency and RNA harvested for sequencing
PubMed ID
27472900
Publication Title
Trisomy 21 consistently activates the interferon response.
Total Samples
12
Submitter’s Institution
No associated institution
Authors
Sullivan KD
,
Lewis HC
,
Hill AA
,
Pandey A
,
Jackson LP
,
Cabral JM
,
Smith KP
,
Liggett LA
,
Gomez EB
,
Galbraith MD
,
DeGregori J
,
Espinosa JM
Source Repository
Sequence Read Archive (SRA)
Samples
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Processing Information
Additional Metadata
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SRR3930001
Normal, replicate 1 [N3_rep1]
c57bl/6
Salmon Quant, Tximport
NA
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SRR3930003
DP16 replicate 1 [P1_rep1]
dp(16)1yey/+
Salmon Quant, Tximport
NA
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SRR3930006
DP16 replicate 2 [P2_rep2]
dp(16)1yey/+
Salmon Quant, Tximport
NA
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SRR3930008
DP16 replicate 2 [P3_rep2]
dp(16)1yey/+
Salmon Quant, Tximport
NA
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SRR3929997
Normal, replicate 1 [N1_rep1]
c57bl/6
Salmon Quant, Tximport
NA
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SRR3929998
Normal, replicate 2 [N1_rep2]
c57bl/6
Salmon Quant, Tximport
NA
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SRR3929999
Normal, replicate 1 [N2_rep1]
c57bl/6
Salmon Quant, Tximport
NA
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SRR3930000
Normal, replicate 2 [N2_rep2]
c57bl/6
Salmon Quant, Tximport
NA
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SRR3930002
Normal, replicate 2 [N3_rep2]
c57bl/6
Salmon Quant, Tximport
NA
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SRR3930004
DP16 replicate 2 [P1_rep2]
dp(16)1yey/+
Salmon Quant, Tximport
NA
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